Enzymatic Ligation

Enzymatic Ligation Technology

Enzymatic ligation builds a full-length RNA from short, high-purity fragments joined by an enzyme. We apply this approach in two ways: enzymatic siRNA synthesis for scalable and flexible manufacturing, and GenClip™ for long RNA from 100 to 500 mer.

Two Applications of Enzymatic Ligation

Both approaches begin with shorter, high-purity fragments that are joined enzymatically, supporting siRNA synthesis at manufacturing scale and long RNA synthesis from 100 to 500 mer.

Enzymatic siRNA Synthesis

Best For: Large-Scale and complex/multivalent siRNA synthesis

Approach: siRNA assembled from short sense and antisense fragments by enzymatic ligation

Fragment Joining: Complementary sense and antisense fragments anneal directly, eliminating the need for a separate guide strand

Key Advantage: Reduced N±1 impurities, fewer purification steps, and manufacturing flexibility through a fragment-based approach

GenClip™ Long RNA Synthesis

Best For: Long RNA, including sgRNA, pre-miRNA, and mRNA

Approach: Long RNA synthesis from 100 to 500 mer

Fragment Joining: Short DNA splints align RNA fragments for enzymatic ligation

Key Advantage: Combines solid-phase synthesis and enzymatic ligation to support yield and quality for longer RNA sequences

Enzymatic siRNA Synthesis

Enzymatic siRNA Synthesis

Our enzymatic siRNA technology utilizes enzyme-mediated ligation of four or more RNA fragments to produce target siRNA compounds through a scalable, fragment-based approach. The RNA fragments can be synthesized using AJIPHASE™ or SPOS and are joined using our proprietary ligation enzyme, designed to accommodate a broad range of modified nucleic acids. A quality-focused control strategy integrates high-purity crude fragment production, ligation process development, and simplified downstream purification, reducing the need for individual purification of sense and antisense fragments and supporting consistent product quality.

Patent: WO2020171092 — Method for Producing Modified Oligonucleotide Including Complementary Sequence

Genclip Process

GenClip™ Long RNA Synthesis

GenClip™ enables the synthesis of long RNA (100–500 mer) with high yield and high quality. It is also usable for the synthesis of sgRNA, pre-miRNA and mRNA, and due to its high quality, long RNA produced with GenClip™ can also be used as analytical standards.

The combination of solid-phase synthesis and enzymatic ligation enables higher yield than conventional methods, and GenClip™ is applicable to various chemical modifications such as 2′-F, 2′-MOE and LNA. GenClip™ is currently available for research use (Non-GMP); GMP manufacturing is under development.

Patent: WO2024048684 — Method for Producing Nucleic Acid Molecule

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siRNA at scale. Long RNA with high quality.